Protein ubiquitination plays an important role in regulating the abundance and conformation of a broad range of eukaryotic proteins. This process involves a cascade of enzymes including ubiquitin-activating enzymes (E1), ubiquitin-conjugating enzymes (E2), and ubiquitin ligases (E3). E1 and E2 represent two families of structurally related proteins and are relatively well characterized. In contrast, the nature and mechanism of E3, proposed to contain activities in catalyzing isopeptide bond formation (ubiquitin ligation) and substrate targeting, remains inadequately understood. Two major families of E3 ubiquitin ligases, the HECT (for homologous to E6-AP C terminus) family and the RING family, have been identified that utilize distinct mechanisms in promoting isopeptide bond formation. Here, we showed that purified RING finger domain of ROC1, an essential subunit of SKP1-cullin/CDC53-F box protein ubiquitin ligases, was sufficient to activate UBCH5c to synthesize polyubiquitin chains. The sequence flanking the RING finger in ROC1 did not contribute to UBCH5c activation, but was required for binding with CUL1. We demonstrated that all cullins, through their binding with ROC proteins, constituted active ubiquitin ligases, suggesting the existence in vivo of a large number of cullin-RING ubiquitin ligases. These results are consistent with the notion that the RING finger domains allosterically activate E2. We suggest that RING-E2, rather than cullin-RING, constitutes the catalytic core of the ubiquitin ligase and that one major function of the cullin subunit is to assemble the RING-E2 catalytic core and substrates together.

译文

蛋白质泛素化在调节各种真核蛋白质的丰度和构象中起着重要作用。此过程涉及一连串的酶,包括泛素激活酶(E1),泛素结合酶(E2)和泛素连接酶(E3)。 E1和E2代表结构相关蛋白的两个家族,并且具有相对较好的特征。相比之下,人们对E3的性质和机理提出了建议,其中E3包含催化异肽键形成(泛素连接)和底物靶向的活性,但尚未充分了解。已鉴定出两个主要的E3泛素连接酶家族,即HECT(与E6-AP C端同源)家族和RING家族,它们利用不同的机制促进异肽键的形成。在这里,我们表明,ROC1的纯化RING指结构域是SKP1-cullin / CDC53-F框蛋白泛素连接酶的必需亚基,足以激活UBCH5c以合成聚泛素链。 ROC1的RING指旁的序列没有促进UBCH5c激活,但是与CUL1结合是必需的。我们证明了所有cullins通过与ROC蛋白结合而构成了活性泛素连接酶,表明体内存在大量cullin-RING泛素连接酶。这些结果与RING指结构域变构激活E2的观点一致。我们建议RING-E2而非cullin-RING构成泛素连接酶的催化核心,而cullin亚基的主要功能之一是将RING-E2催化核心和底物组装在一起。

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