Damage DNA binding protein 2 (DDB2) has a high affinity for UV-damaged DNA and has been implicated in the initial steps of global genome nucleotide excision repair (NER) in mammals. DDB2 binds to CUL4A and forms an E3 ubiquitin ligase. In this study, we have analyzed the properties of DDB2 and CUL4A in vivo. The majority of DDB2 and CUL4A diffuse in the nucleus with a diffusion rate consistent with a high molecular mass complex. Essentially all DDB2 binds to UV-induced DNA damage, where each molecule resides for approximately 2 minutes. After the induction of DNA damage, DDB2 is proteolytically degraded with a half-life that is two orders of magnitude larger than its residence time on a DNA lesion. This indicates that binding to damaged DNA is not the primary trigger for DDB2 breakdown. The bulk of DDB2 binds to and dissociates from DNA lesions independently of damage-recognition protein XPC. Moreover, the DDB2-containing E3 ubiquitin ligase is bound to many more damaged sites than XPC, suggesting that there is little physical interaction between the two proteins. We propose a scenario in which DDB2 prepares UV-damaged chromatin for assembly of the NER complex.

译文

DNA损伤蛋白结合蛋白2(DDB2)对紫外线损伤的DNA具有高亲和力,并与哺乳动物的全基因组核苷酸切除修复(NER)的初始步骤有关。 DDB2与CUL4A结合并形成E3泛素连接酶。在这项研究中,我们已经分析了DDB2和CUL4A在体内的特性。 DDB2和CUL4A的大部分以与高分子复合物一致的扩散速率扩散到细胞核中。基本上所有DDB2都与紫外线诱导的DNA损伤结合,每个分子在其中停留约2分钟。诱导DNA损伤后,DDB2被蛋白水解降解,其半衰期比其在DNA病变上的停留时间长两个数量级。这表明与损坏的DNA结合不是DDB2分解的主要诱因。 DDB2的大部分独立于损伤识别蛋白XPC与DNA损伤结合和解离。此外,与XPC相比,含DDB2的E3泛素连接酶结合的损伤位点更多,这表明这两种蛋白之间几乎没有物理相互作用。我们提出了一种方案,其中DDB2制备UV损伤的染色质以组装NER复合物。

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