In this study, multiplex nested RT-PCR (mnRT-PCR) was applied to simultaneous detect multiplex PCR with the higher sensitivity of nested PCR that is required for avian influenza, infectious bronchitis and Newcastle disease virus using two steps of amplification. For the first PCR, primers that were specific for each virus were newly designed from the nucleoprotein gene of AIV, the nucleocapsid protein gene of IBV and the fusion protein gene of NDV to amplify products of 665, 386 and 236 nucleotides, respectively. The multiplex PCR step provides mass amplification using common primers, which increased markedly the sensitivity of the test. Non-specific reactions were not observed when other viruses and bacteria were used for evaluating the mnRT-PCR. As a field application, 172 samples were tested by RT-PCR and mnRT-PCR. Among these samples, the concordance rates for mnRT-PCR and the single conventional RT-PCR showed 98.9% (kappa=0.98) and 98.8% (kappa=0.96) similarity for IBV and AIV, respectively. As a result, it is recommended the multiplex nested PCR as an effective tool for detecting and studying the molecular epidemiology of various mixed infections of one or more of these viruses in poultry.

译文

:在这项研究中,多重巢式RT-PCR(mnRT-PCR)被用于同时检测多重PCR,其巢式PCR灵敏度更高,这是禽流感,传染性支气管炎和新城疫病毒的两步扩增。对于第一次PCR,从AIV的核蛋白基因,IBV的核衣壳蛋白基因和NDV的融合蛋白基因重新设计了每种病毒的特异性引物,分别扩增665、386和236个核苷酸的产物。多重PCR步骤使用普通引物进行质量扩增,从而显着提高了测试的灵敏度。当使用其他病毒和细菌评估mnRT-PCR时,未观察到非特异性反应。作为现场应用,通过RT-PCR和mnRT-PCR测试了172个样品。在这些样本中,mnRT-PCR和单个常规RT-PCR的一致性率分别显示IBV和AIV的相似度为98.9%(kappa = 0.98)和98.8%(kappa = 0.96)。因此,建议将多重嵌套PCR用作检测和研究禽类中一种或多种这些病毒的各种混合感染的分子流行病学的有效工具。

+1
+2
100研值 100研值 ¥99课程
检索文献一次
下载文献一次

去下载>

成功解锁2个技能,为你点赞

《SCI写作十大必备语法》
解决你的SCI语法难题!

技能熟练度+1

视频课《玩转文献检索》
让你成为检索达人!

恭喜完成新手挑战

手机微信扫一扫,添加好友领取

免费领《Endnote文献管理工具+教程》

微信扫码, 免费领取

手机登录

获取验证码
登录