The complete genome of a tymovirus infecting Solanum violaefolium was sequenced. The genome comprised 6284 nt, with a 5'-UTR of 137 nt and a comparatively longer 3'-UTR of 121 nt. Sequence analysis confirmed three ORFs encoding a movement protein, a polyprotein, and a coat protein (CP). The isolate was considered to be the Tomato blistering mosaic virus (ToBMV) based on a CP amino acid sequence identity of 95.3 %. The nucleotide sequence of the complete genome of the S. violaefolium isolate, however, differed markedly from the other two reported ToBMV isolates, with identities of 76.6 and 76.3 %, below one of the demarcation criteria of the genus Tymovirus (overall genome identity of 80 %). No recombination signals were detected in the genome of this isolate. The high identity of the CP amino acid sequence and similar host responses suggest that the S. violaefolium isolate belongs to the same species as the Tomato blistering mosaic virus. The sequence analysis of this ToBMV isolate thus suggests that the demarcation criterion of 80 % overall genome sequence identity in the genus Tymovirus may require revision.

译文

:对感染小菜蛾的鼓膜病毒的完整基因组进行了测序。基因组包含6284nt,具有5'-UTR为137nt和相对更长的3'-UTR为121nt。序列分析证实了三个ORF,它们编码运动蛋白,多蛋白和外壳蛋白(CP)。基于95.3%的CP氨基酸序列同一性,该分离物被认为是番茄起泡花叶病毒(ToBMV)。但是,紫罗兰链球菌分离物完整基因组的核苷酸序列与其他两个报道的ToBMV分离物显着不同,同一性分别为76.6和76.3%,低于胸膜炎病毒属的一种划界标准(总体基因组同一性为80)。 %)。在该分离物的基因组中未检测到重组信号。 CP氨基酸序列的高度同一性和相似的宿主反应表明,紫堇链球菌分离株与番茄起泡花叶病毒属于同一物种。因此,对该ToBMV分离株的序列分析表明,在Tymovirus属中,总基因组序列同一性为80%的分界标准可能需要修改。

+1
+2
100研值 100研值 ¥99课程
检索文献一次
下载文献一次

去下载>

成功解锁2个技能,为你点赞

《SCI写作十大必备语法》
解决你的SCI语法难题!

技能熟练度+1

视频课《玩转文献检索》
让你成为检索达人!

恭喜完成新手挑战

手机微信扫一扫,添加好友领取

免费领《Endnote文献管理工具+教程》

微信扫码, 免费领取

手机登录

获取验证码
登录