A Gram-staining-negative, rod-shaped, non-spore-forming bacterium isolated as a contaminant from a biopharmaceutical process (strain CCUG 53591(T)) was studied for its taxonomic allocation. On the basis of 16S rRNA gene sequence similarity data, this strain was clearly allocated to the genus Herminiimonas. Herminiimonas saxobsidens was shown to be the most closely related species on the basis of 16S rRNA gene sequence similarity (99.9 %), followed by Herminiimonas glaciei (99.6 %) and Herminiimonas arsenicoxydans (98.8 %). Strain ND5, previously reported as H. glaciei, but showing 100 % 16S rRNA gene sequence similarity to strain CCUG 53591(T), was included in the comparative study. Similarities to all other species of the genus Herminiimonas were below 98.0 %. Chemotaxonomic data (major ubiquinone, Q-8; major polar lipids, phosphatidylethanolamine, phosphatidylglycerol and diphosphatidylglycerol; and major fatty acids, C(17 : 0) cyclo, C(19 : 0) cyclo ω8c and C(16 : 0,) with C(10 : 0) 3-OH as hydroxylated fatty acid) supported the affiliation of the isolate to the genus Herminiimonas. DNA-DNA hybridization results (mean values) for strain CCUG 53591(T) with H. saxobsidens CCUG 59860(T) (34 %), H. glaciei DSM 21140(T) (57 %), H. arsenicoxydans DSM 17148(T) (17 %) and Herminiimonas fonticola S-94(T) (11 %) clearly supported the separate taxonomic position of this strain. Strain ND5 showed DNA-DNA similarities of 78, 56 and 52 % to strain CCUG 53591(T), H. glaciei DSM 21140(T) and H. saxobsidens CCUG 59860(T), respectively. Phenotypic differentiation of the isolate from the most closely related species was possible by various features. Hence, strain CCUG 53591(T) represents a novel species, for which the name Herminiimonas contaminans sp. nov. is proposed, with the type strain CCUG 53591(T) ( = CCM 7991(T)). Strain ND5 is a second strain of this species.

译文

:从生物制药过程(菌株CCUG 53591(T))中分离出作为污染物的革兰氏染色阴性,杆状,无芽孢的细菌,对其分类进行了研究。根据16S rRNA基因序列相似性数据,该菌株被明确分配给Herminiimonas属。根据16S rRNA基因序列相似性,沙门氏菌是最密切相关的物种(99.9%),其次是冰河埃米菌(99.6%)和亚砷酸单胞菌(98.8%)。 ND5菌株以前被报道为H. glaciei,但显示出与CCUG 53591(T)菌株具有100 %%的16S rRNA基因序列相似性,被纳入比较研究。与Herminiimonas属的所有其他物种的相似性低于98.0%。化学分类数据(主要泛醌Q-8;主要极性脂质,磷脂酰乙醇胺,磷脂酰甘油和二磷脂酰甘油;以及主要脂肪酸C(17:0)环,C(19:0)环ω8c和C(16:0,) C(10:0)3-OH为羟基脂肪酸)支持分离物与Herminiimonas的隶属关系。菌株CCUG 53591(T)与萨克斯链球菌CCUG 59860(T)(34%),冰川嗜血杆菌DSM 21140(T)(57%),砷氧化单链菌DSM 17148(T)的DNA-DNA杂交结果(平均值) )(17%)和Herminiimonas fonticola S-94(T)(11%)清楚地支持了该菌株的单独分类学位置。 ND5菌株与CCUG 53591(T),H。glaciei DSM 21140(T)和Saxobsidens CCUG 59860(T)的DNA-DNA相似性分别为78%,56%和52%。分离物从最密切相关的物种的表型分化可能有多种特征。因此,菌株CCUG 53591(T)代表了一个新物种,其名称为Herminiimonas contaminans sp。十一月提出了一种类型为CCUG 53591(T)(= CCM 7991(T))的传感器。菌株ND5是该菌种的第二个菌株。

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