A Gram-negative, strictly aerobic, rod-shaped, non-motile, non-spore-forming bacterial strain, designated Gsoil 104T, was isolated from a soil sample from a ginseng field in Pocheon Province (South Korea) and was characterized taxonomically by using a polyphasic approach. On the basis of 16S rRNA gene sequence similarities, strain Gsoil 104T was shown to belong to the family Sphingobacteriaceae, being related to Pedobacter africanus DSM 12126T (97.0%), Pedobacter caeni LMG 22862T (96.9%), Pedobacter cryoconitis DSM 14825T (96.8%) and Pedobacter heparinus DSM 2366T (96.6%). The phylogenetic distance from any other Pedobacter species with a validly published name was greater than 3.4% (i.e.<96.6% 16S rRNA gene sequence similarity). DNA-DNA hybridization experiments showed that values for DNA-DNA relatedness between strain Gsoil 104T and its phylogenetically closest neighbours were below 37%. The G+C content of the genomic DNA was 43.6 mol%. The predominant respiratory quinone was MK-7. The major fatty acids were C16:1omega7c, iso-C15:0, C16:0, iso-C17:0 3-OH and iso-C15:0 2-OH. These chemotaxonomic data support the affiliation of strain Gsoil 104T to the genus Pedobacter. On the basis of its phenotypic properties and phylogenetic distinctiveness, strain Gsoil 104T represents a novel species in the genus Pedobacter, for which the name Pedobacter ginsengisoli sp. nov. is proposed. The type strain is Gsoil 104T (=KCTC 12576T=LMG 23399T).

译文

:从韩国抱川县人参田的土壤样品中分离出革兰氏阴性,严格需氧,杆状,无运动,无芽孢形成的细菌菌株,称为Gsoil 104T,并进行了分类学表征通过使用多相方法。根据16S rRNA基因序列相似性,Gsoil 104T菌株显示为Sphingobacteriaceae家族,与非洲Pedobacter DSC 12126T(97.0%),caPedobacter caeni LMG 22862T(96.9%),Pedobacter低温锥虫DSM 14825T(96.8%)相关。 )和肝杆菌(Pedobacter heparinus)DSM 2366T(96.6%)。与其他任何具有有效公布名称的Pedobacter物种的系统发育距离均大于3.4%(即<96.6%的16S rRNA基因序列相似性)。 DNA-DNA杂交实验表明,菌株Gsoil 104T与其系统发育上最接近的邻居之间的DNA-DNA相关性值低于37%。基因组DNA的GC含量为43.6mol%。主要的呼吸醌为MK-7。主要脂肪酸为C16:10mega7c,iso-C15:0,C16:0,iso-C17:0 3-OH和iso-C15:0 2-OH。这些化学分类数据支持菌株Gsoil 104T与Pedobacter属的隶属关系。基于其表型特性和系统发育上的独特性,Gsoil 104T菌株代表了Pedobacter属中的一个新物种,其名称为Pedobacter ginsengisoli sp。十一月被提议。类型应变是Gsoil 104T(= KCTC 12576T = LMG 23399T)。

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