• 【一种新颖的机电一体化体重支持系统。】 复制标题 收藏 收藏
    DOI:10.1109/TNSRE.2006.881556 复制DOI
    作者列表:Frey M,Colombo G,Vaglio M,Bucher R,Jörg M,Riener R
    BACKGROUND & AIMS: :A novel mechatronic body weight support (BWS) system has been developed to provide precise body weight unloading for patients with neurological or other impairments during treadmill training. The system is composed of a passive elastic spring element to take over the main unloading force and an active closed-loop controlled electric drive to generate the exact desired force. Both force generating units, the passive spring and the active electric drive, act on the patient via a polyester rope connected to a harness worn by the patient. The length of the rope can be adjusted with an electric winch to adapt the system to different patient sizes. The system is fully computer controlled. At unloading loads of up to 60 kg and walking speeds of up to 3.2 km/h, the mean unloading error and the maximum unloading error of the presented BWS system was less than 1 and 3 kg, respectively. The performance was compared with those of two purely passive BWS systems currently being used by most other rehabilitation groups. This comprised counterweight systems and static BWS systems with fixed rope lengths. Counterweight systems reached mean and maximum unloading errors of up to 5.34 and 16.22 kg, respectively. The values for the static BWS were 11.02 kg and 27.67 kg, respectively. The novel mechatronic BWS system presented in this study adjusts desired unloading changes of up to 20 kg within less than 100 ms. Thus, not only constant BWS, but also gait cycle dependent or time variant oscillations of the desired force can be realized with high accuracy. Precise and constant unloading force is believed to be an important prerequisite for BWS gait therapy, where it is important to generate physiologically correct segmental dynamics and ground reaction forces. Thus, the novel BWS system presented in this paper is an important contribution to maximize the therapeutic outcome of human gait rehabilitation.
    背景与目标: :已开发出新型机电一体化体重支持(BWS)系统,以在跑步机训练期间为患有神经系统疾病或其他障碍的患者提供精确的体重减轻。该系统由一个被动的弹性弹簧元件(承担主要的卸载力)和一个主动的闭环控制电驱动装置组成,以产生确切的所需力。被动发条和主动电驱动两个力产生单元均通过连接到患者佩戴的安全带上的聚酯绳作用在患者身上。绳索的长度可以用电动绞盘调节,以使系统适应不同的患者体型。该系统完全由计算机控制。在最高60 kg的卸载负荷和最高3.2 km / h的步行速度下,所提出的BWS系统的平均卸载误差和最大卸载误差分别小于1 kg和3 kg。将该性能与大多数其他康复团体目前使用的两个纯被动BWS系统的性能进行了比较。这包括配重系统和具有固定绳索长度的静态BWS系统。配重系统的平均和最大卸载误差分别高达5.34和16.22 kg。静态BWS的值分别为11.02 kg和27.67 kg。这项研究中提出的新型机电一体化BWS系统可在不到100 ms的时间内将所需的卸荷变化调整至20 kg。因此,不仅可以实现恒定的BWS,而且还可以高精度地实现与步态周期有关的或所需力的随时间变化的振荡。精确和恒定的卸载力被认为是BWS步态治疗的重要前提,在步态治疗中,产生生理上正确的节段动力学和地面反作用力很重要。因此,本文提出的新型BWS系统是最大程度地提高步态康复治疗效果的重要贡献。
  • 【与人神经胶质瘤有关的人核糖体蛋白L14.22的全长新基因。】 复制标题 收藏 收藏
    DOI: 复制DOI
    作者列表:Qi ZY,Hui GZ,Li Y,Zhou ZX,Gu SH,Xie Y
    BACKGROUND & AIMS: BACKGROUND:This study was undertaken to obtain differentially expressed genes related to human glioma by cDNA microarray and the characterization of a novel full-length gene. METHODS:Total RNA was extracted form human glioma and normal brain tissue, and mRNA was used as a probe. The results of hybridization procedure were scanned with the computer system. The gene named 507E08 cone was subsequently analyzed by northern blot, bioinformatic approach, and protein expression. RESULTS:Fifteen differentially expressed genes were obtained from human glioma by hybridization and scanning for four times. Northern blot analysis confirmed that the 507E08 clone was low expressed in human brain tissue and over expressed in human glioma tissues. The analysis of BLASTn and BLASTx showed that the 507E08 clone was a novel full-length gene, which codes 203 amino acid of protein and is called human ribosomal protein 14.22 gene. The nucleotide sequence had been submitted to the GenBank with the accession number of AF329277. After expression in E. coli., protein yielded a major band of apparent molecular mass 22 kDa on an SDS-PAGE gel. CONCLUSIONS:cDNA microarray technology can be successfully used to identify differentially expressed genes. The novel full-length gene of human ribosomal protein 13.22 may be correlated with the development of human glioma.
    背景与目标: 背景:本研究旨在通过cDNA微阵列技术获得与人神经胶质瘤相关的差异表达基因,并鉴定一个新的全长基因。
    方法:从人脑胶质瘤和正常脑组织中提取总RNA,并以mRNA为探针。杂交程序的结果用计算机系统扫描。随后通过Northern印迹,生物信息学方法和蛋白质表达来分析名为507E08视锥细胞的基因。
    结果:通过杂交和扫描4次,从人脑胶质瘤中获得了15个差异表达基因。 Northern印迹分析证实507E08克隆在人脑组织中低表达而在人脑胶质瘤组织中高表达。对BLASTn和BLASTx的分析表明,507E08克隆是一个新颖的全长基因,其编码蛋白质的203个氨基酸,被称为人核糖体蛋白质14.22基因。该核苷酸序列已提交给GenBank,登录号为AF329277。在大肠杆菌中表达后,蛋白质在SDS-PAGE凝胶上产生一条表观分子量为22 kDa的主带。
    结论:cDNA微阵列技术可成功用于鉴定差异表达的基因。人核糖体蛋白13.22的新的全长基因可能与人脑胶质瘤的发展有关。
  • 【抗原特异性T细胞克隆在胶原疾病中的意义:用新型T细胞克隆性评估系统进行分析。】 复制标题 收藏 收藏
    DOI:10.2169/internalmedicine.36.242 复制DOI
    作者列表:Yamamoto K
    BACKGROUND & AIMS: The involvement of antigen-specific T cells in the pathogenesis of collagen diseases is still controversial. The final stages of collagen diseases are usually characterized by the dominance of inflammation. Therefore, antigen non-specific factors, such as inflammatory cytokines, probably play an important role in this process. On the other hand, the methods available to analyze the antigen-specific aspects of the immune response are still limited. Here we review our novel system of T cell clonality analysis based on the idea that activated antigen-specific T cells should form accumulating clones among the lymphocyte population. Using this method, dynamic changes of clonal accumulation of T cells could be evaluated during antigenic stimulation in vivo and in vitro. The significance of antigen-specific T cell clones in collagen diseases is discussed using data obtained from patients with rheumatoid arthritis and systemic lupus erythematosus.

    背景与目标: 抗原特异性T细胞是否参与胶原蛋白疾病的发病机制仍存在争议。胶原蛋白疾病的最后阶段通常以炎症占优势为特征。因此,抗原非特异性因子,例如炎性细胞因子,可能在此过程中起重要作用。另一方面,可用于分析免疫应答的抗原特异性方面的方法仍然有限。在这里,我们基于激活的抗原特异性T细胞应在淋巴细胞群体中形成累积克隆的想法,回顾了我们的T细胞克隆性分析的新系统。使用这种方法,可以在体内和体外抗原刺激过程中评估T细胞克隆积累的动态变化。利用类风湿性关节炎和系统性红斑狼疮患者获得的数据,讨论了抗原特异性T细胞克隆在胶原蛋白疾病中的重要性。

  • 【在其他健康的分枝杆菌病患者中发现了新的STAT1等位基因。】 复制标题 收藏 收藏
    DOI:10.1371/journal.pgen.0020131 复制DOI
    作者列表:
    BACKGROUND & AIMS: :The transcription factor signal transducer and activator of transcription-1 (STAT1) plays a key role in immunity against mycobacterial and viral infections. Here, we characterize three human STAT1 germline alleles from otherwise healthy patients with mycobacterial disease. The previously reported L706S, like the novel Q463H and E320Q alleles, are intrinsically deleterious for both interferon gamma (IFNG)-induced gamma-activating factor-mediated immunity and interferon alpha (IFNA)-induced interferon-stimulated genes factor 3-mediated immunity, as shown in STAT1-deficient cells transfected with the corresponding alleles. Their phenotypic effects are however mediated by different molecular mechanisms, L706S affecting STAT1 phosphorylation and Q463H and E320Q affecting STAT1 DNA-binding activity. Heterozygous patients display specifically impaired IFNG-induced gamma-activating factor-mediated immunity, resulting in susceptibility to mycobacteria. Indeed, IFNA-induced interferon-stimulated genes factor 3-mediated immunity is not affected, and these patients are not particularly susceptible to viral disease, unlike patients homozygous for other, equally deleterious STAT1 mutations recessive for both phenotypes. The three STAT1 alleles are therefore dominant for IFNG-mediated antimycobacterial immunity but recessive for IFNA-mediated antiviral immunity at the cellular and clinical levels. These STAT1 alleles define two forms of dominant STAT1 deficiency, depending on whether the mutations impair STAT1 phosphorylation or DNA binding.
    背景与目标: 转录因子信号转导子和转录激活因子1(STAT1)在抵抗分枝杆菌和病毒感染的免疫中起着关键作用。在这里,我们表征了来自其他健康的分枝杆菌病患者的三个人STAT1种系等位基因。像新的Q463H和E320Q等位基因一样,先前报道的L706S对干扰素γ(IFNG)诱导的γ激活因子介导的免疫和干扰素α(IFNA)诱导的干扰素刺激的基因因子3介导的免疫都具有内在的危害,如用相应等位基因转染的STAT1缺陷细胞所示。然而,它们的表型作用是由不同的分子机制介导的,L706S影响STAT1磷酸化,Q463H和E320Q影响STAT1 DNA结合活性。杂合子患者表现出特别受损的IFNG诱导的γ活化因子介导的免疫力,导致对分枝杆菌的易感性。确实,IFNA诱导的干扰素刺激基因因子3介导的免疫没有受到影响,并且这些患者对病毒性疾病特别不敏感,这与两种表型均隐性存在的其他同样有害的STAT1突变的患者不同。因此,在细胞和临床水平上,这三个STAT1等位基因在IFNG介导的抗分枝杆菌免疫中占主导地位,而在IFNA介导的抗病毒免疫中却处于隐性地位。这些STAT1等位基因定义了两种主要形式的STAT1缺陷,具体取决于突变是否损害STAT1磷酸化或DNA结合。
  • 【MSX1中的一个新的错义突变是常染色体隐性遗传性少突牙畸形的根源,并伴有巴基斯坦家庭的牙齿异常。】 复制标题 收藏 收藏
    DOI:10.1007/s10038-006-0037-x 复制DOI
    作者列表:Chishti MS,Muhammad D,Haider M,Ahmad W
    BACKGROUND & AIMS: :Tooth agenesis constitutes the most common anomaly of dental development in humans. In the majority of familial cases of hypodontia alone or in association with other anomalies, the mode of inheritance is autosomal dominant. In the present study, we have identified two distantly related consanguineous Pakistani kindreds with an autosomal recessive form of oligodontia with associated dental anomalies. Locus in this case has been mapped on chromosome 4p16.1-p16.3. The maximum two-point LOD score of 2.85 (theta=0.0) was obtained at markers D4S2925 and D4S2285. A maximum multipoint LOD score exceeding 4 was obtained at the same markers. Recombination events observed in affected individuals localized the disease locus between markers D4S412 and D4S2935, spanning a 9.24-cM region on chromosome 4p16.1-p16.3. Sequence analysis of candidate gene MSX1 revealed a novel recessive missense mutation resulting in substitution of alanine to threonine amino acid (p. A219T), located in the MSX1 homeodomain, which is important for DNA binding and protein-protein interaction. The mutation, p. A219T, is the first recessive mutation identified in MSX1.
    背景与目标: 牙齿发育不全是人类牙齿发育的最常见异常。在大多数单独的或与其他异常有关的低血压的家族性病例中,遗传方式是常染色体显性的。在本研究中,我们确定了两个远缘近亲的巴基斯坦亲戚,他们是常染色体隐性形式的少齿畸形,并伴有相关的牙齿异常。在这种情况下,基因座已定位在染色体4p16.1-p16.3上。在标记D4S2925和D4S2285上获得的最大两点LOD得分为2.85(θ= 0.0)。在相同的标记处获得的最大多点LOD得分超过4。在受影响的个体中观察到的重组事件将疾病基因定位在标记D4S412和D4S2935之间,跨越染色体4p16.1-p16.3上的9.24-cM区。候选基因MSX1的序列分析揭示了一种新的隐性错义突变,该突变导致将丙氨酸替换为位于MSX1同源域的苏氨酸氨基酸(p。A219T),这对于DNA结合和蛋白质-蛋白质相互作用很重要。突变p。 A219T是MSX1中鉴定出的第一个隐性突变。
  • 【肿瘤进展-差异治疗的目标。】 复制标题 收藏 收藏
    DOI:10.1002/jcp.20728 复制DOI
    作者列表:Pardee AB
    BACKGROUND & AIMS: :Differential killing of the patient's cancer cells versus normal cells is a necessity for chemotherapy. Advantage can be taken of close regulations of gene expression and of enzyme activity that are essential for normal cell functioning, and that are altered during tumor progression. Summarized here is our research on four such progression changes of cancer cells; some deregulate proliferation control and others decrease programmed death (apoptosis). These processes will be illustrated with examples of potential chemotherapies based on them. Methods for discovery of such changes include Differential Display and microarrays.
    背景与目标: :与正常细胞相比,不同程度地杀死患者的癌细胞是化疗的必要条件。可以利用基因表达和酶活性的紧密调节,这些调节对于正常的细胞功能是必不可少的,并且在肿瘤进展过程中会改变。这里总结了我们对癌细胞的四个这样的进展变化的研究。一些人放松了对增殖的控制,而另一些人减少了程序性死亡(细胞凋亡)。这些过程将以基于它们的潜在化学疗法为例进行说明。发现这种变化的方法包括差异显示和微阵列。
  • 【铜绿假单胞菌的广泛基因组可塑性通过临床分离株中新基因的鉴定和分布研究揭示。】 复制标题 收藏 收藏
    DOI:10.1128/IAI.00546-06 复制DOI
    作者列表:Shen K,Sayeed S,Antalis P,Gladitz J,Ahmed A,Dice B,Janto B,Dopico R,Keefe R,Hayes J,Johnson S,Yu S,Ehrlich N,Jocz J,Kropp L,Wong R,Wadowsky RM,Slifkin M,Preston RA,Erdos G,Post JC,Ehrlich GD,Hu FZ
    BACKGROUND & AIMS: :The distributed genome hypothesis (DGH) states that each strain within a bacterial species receives a unique distribution of genes from a population-based supragenome that is many times larger than the genome of any given strain. The observations that natural infecting populations are often polyclonal and that most chronic bacterial pathogens have highly developed mechanisms for horizontal gene transfer suggested the DGH and provided the means and the mechanisms to explain how chronic infections persist in the face of a mammalian host's adaptive defense mechanisms. Having previously established the validity of the DGH for obligate pathogens, we wished to evaluate its applicability to an opportunistic bacterial pathogen. This was accomplished by construction and analysis of a highly redundant pooled genomic library containing approximately 216,000 functional clones that was constructed from 12 low-passage clinical isolates of Pseudomonas aeruginosa, 6 otorrheic isolates and 6 from other body sites. Sequence analysis of 3,214 randomly picked clones (mean insert size, approximately 1.4 kb) from this library demonstrated that 348 (10.8%) of the clones were unique with respect to all genomic sequences of the P. aeruginosa prototype strain, PAO1. Hypothetical translations of the open reading frames within these unique sequences demonstrated protein homologies to a number of bacterial virulence factors and other proteins not previously identified in P. aeruginosa. PCR and reverse transcription-PCR-based assays were performed to analyze the distribution and expression patterns of a 70-open reading frame subset of these sequences among 11 of the clinical strains. These sequences were unevenly distributed among the clinical isolates, with nearly half (34/70) of the novel sequences being present in only one or two of the individual strains. Expression profiling revealed that a vast majority of these sequences are expressed, strongly suggesting they encode functional proteins.
    背景与目标: :分布式基因组假设(DGH)指出,细菌物种中的每个菌株都从基于种群的超基因组中获得独特的基因分布,其比任何给定菌株的基因组都要大很多倍。自然感染人群通常是多克隆的,大多数慢性细菌病原体具有高度发展的水平基因转移机制的观察结果提示了DGH,并提供了解释哺乳动物宿主面对适应性防御机制时慢性感染如何持续存在的手段和机制。先前已确定DGH对专性病原体的有效性,我们希望评估其对机会细菌病原体的适用性。这是通过构建和分析包含约216,000个功能性克隆的高度冗余的集合基因组文库完成的,该文库由铜绿假单胞菌的12种低通道临床分离株,6种耳泻分离株和6个其他身体部位构建而成。对来自该文库的3,214个随机挑选的克隆(平均插入片段大小,约1.4 kb)进行序列分析,结果表明,对于铜绿假单胞菌原型菌株PAO1的所有基因组序列,其中348个(10.8%)克隆是唯一的。在这些独特序列内的开放阅读框的假想翻译证明了与许多细菌毒力因子和以前在铜绿假单胞菌中未鉴定出的其他蛋白质的蛋白质同源性。进行了基于PCR和逆转录PCR的分析,以分析这些序列的70个开放阅读框子集在11种临床菌株中的分布和表达模式。这些序列在临床分离株中分布不均,只有一半或34个新序列出现在一个或两个单独的菌株中。表达谱分析表明这些序列中的绝大多数都被表达,强烈暗示它们编码功能蛋白。
  • 【克隆一种在癌症中高度过表达的基因,该基因编码一种新型的含有KH域的蛋白质。】 复制标题 收藏 收藏
    DOI:10.1038/sj.onc.1201110 复制DOI
    作者列表:Müeller-Pillasch F,Lacher U,Wallrapp C,Micha A,Zimmerhackl F,Hameister H,Varga G,Friess H,Büchler M,Beger HG,Vila MR,Adler G,Gress TM
    BACKGROUND & AIMS: :In a previous large scale screen for differentially expressed genes in pancreatic cancer, we identified a gene highly overexpressed in cancer encoding a novel protein with four K-homologous (KH) domains. KH-domains are found in a subset of RNA-binding proteins, including pre-mRNA-binding (hnRNP) K protein and the fragile X mental retardation gene product (FMR1). By fluorescence in situ hybridization (FISH) the identified gene named koc (KH domain containing protein overexpressed in cancer) was assigned to chromosome 7p11.5. Two pseudogenes were localised on chromosome 6 and 11. The cloned koc cDNA has a 250 bp 5'-UTR, a 1740 bp ORF and a 2168 bp 3'-UTR. The AU-rich 3'-untranslated region of koc contains eight AUUUA and four AUUUUUA reiterated motifs. The deduced koc protein with 580 amino-acids has a relative molecular mass (Mr) of approximately 65,000 (65 K). The koc transcript is highly overexpressed in pancreatic cancer cell lines and in pancreatic cancer tissue as compared to both, normal pancreas and chronic pancreatitis tissue. High levels of expression were as well found in tissue samples of other human tumours. As the KH domain has been shown to be involved in the regulation of RNA synthesis and metabolism, we speculate that koc may assume a role in the regulation of tumour cell proliferation by interfering with transcriptional and or posttranscriptional processes. However, the precise role of koc in human tumour cells is unknown and remains to be elucidated.
    背景与目标: :在先前针对胰腺癌中差异表达基因的大规模筛选中,我们鉴定了在癌症中高度过表达的基因,该基因编码具有四个K同源(KH)域的新型蛋白质。 KH结构域存在于RNA结合蛋白的子集中,包括前mRNA结合(hnRNP)K蛋白和脆弱的X智力低下基因产物(FMR1)。通过荧光原位杂交(FISH),将鉴定出的名为koc的基因(含有在癌症中过度表达的KH域蛋白)分配给7p11.5染色体。两个假基因位于6号和11号染色体上。克隆的koc cDNA具有250 bp的5'-UTR,1740 bp的ORF和2168 bp的3'-UTR。富含AU的3'非翻译区域的koc包含八个AUUUA和四个AUUUUUA重复的基序。推导的具有580个氨基酸的koc蛋白的相对分子质量(Mr)约为65,000(65 K)。与正常胰腺和慢性胰腺炎组织相比,koc转录本在胰腺癌细胞系和胰腺癌组织中高度过表达。在其他人类肿瘤的组织样本中也发现了高水平的表达。由于已经显示出KH结构域参与RNA合成和代谢的调节,我们推测koc可能通过干扰转录和/或转录后过程而在调节肿瘤细胞增殖中发挥作用。但是,koc在人肿瘤细胞中的确切作用尚不清楚,尚待阐明。
  • 【一种新型的人类ERK磷酸酶调节H-ras和v-raf信号转导。】 复制标题 收藏 收藏
    DOI:10.1038/sj.onc.1201106 复制DOI
    作者列表:Shin DY,Ishibashi T,Choi TS,Chung E,Chung IY,Aaronson SA,Bottaro DP
    BACKGROUND & AIMS: :A cDNA encoding a novel human extracellularly-regulated kinase (ERK) phosphatase, designated B59, was isolated from a B5/589 human mammary epithelial cell cDNA library. The 1104 nucleotide open reading frame encodes 368 amino acids including the highly conserved catalytic site sequence of protein phosphotyrosine phosphatases (PTPs), VXVHCXXGXXR, at amino acid position 276-287. The predicted 70 amino acid stretch surrounding the HC motif shares significant sequence identity with other human dual specificity PTPs (dsPTPs), including the known ERK PTPs CL100, PAC1, B23, as well as the dsPTPs VH-1 and VHR. B59 protein synthesized in vitro in a rabbit reticulocyte lysate dephosphorylated rat ERK1 and ERK2 proteins whose phosphorylation had been stimulated by v-mos kinase added to the lysate. Ectopic expression of B59 in NIH3T3 fibroblasts inhibited the induction of an oncogene-responsive promoter by the dominant-activating raf mutant, raf-BXB. Moreover, cotransfection of NIH3T3 cells with B59 inhibited morphological transformation by H-ras and v-raf oncogenes. These results suggest that B59 suppresses the transforming activity of H-ras or v-raf oncogenes through ERK dephosphorylation and inactivation.
    背景与目标: :从B5 / 589人乳腺上皮细胞cDNA文库中分离出一种编码新型人胞外调节激酶(ERK)磷酸酶的cDNA,命名为B59。 1104个核苷酸的开放阅读框编码368个氨基酸,其中包括高度保守的蛋白质磷酸酪氨酸磷酸酶(PTP)催化位点序列VXVHCXXGXXR,位于氨基酸位置276-287。 HC基序周围的预测的70个氨基酸段与其他人的双特异性PTP(dsPTP),包括已知的ERK PTP CL100,PAC1,B23以及dsPTP VH-1和VHR,具有明显的序列同一性。在兔网织红细胞裂解物中体外合成的B59蛋白将磷酸化的大鼠ERK1和ERK2蛋白磷酸化,并通过添加到裂解物中的v-mos激酶刺激了磷酸化。 B59在NIH3T3成纤维细胞中的异位表达抑制了由显性激活raf突变体raf-BXB诱导的癌基因应答性启动子。此外,NIH3T3细胞与B59的共转染可抑制H-ras和v-raf癌基因的形态转化。这些结果表明,B59通过ERK去磷酸化和失活抑制H-ras或v-raf癌基因的转化活性。
  • 【新型抗CD4单克隆抗体将人免疫缺陷病毒感染和CD4细胞融合与病毒结合分离开来。】 复制标题 收藏 收藏
    DOI:10.1084/jem.172.4.1233 复制DOI
    作者列表:Healey D,Dianda L,Moore JP,McDougal JS,Moore MJ,Estess P,Buck D,Kwong PD,Beverley PC,Sattentau QJ
    BACKGROUND & AIMS: :Human immunodeficiency virus (HIV) binds to cells via an interaction between CD4 and the virus envelope glycoprotein, gp120. Previous studies have localized the high affinity binding site for gp120 to the first domain of CD4, and monoclonal antibodies (mAbs) reactive with this region compete with gp120 binding and thereby block virus infectivity and syncytium formation. Despite a detailed understanding of the binding of gp120 to CD4, little is known of subsequent events leading to membrane fusion and virus entry. We describe two new mAbs reactive with the third domain of CD4 that inhibit steps subsequent to virus binding critical for HIV infectivity and cell fusion. Binding of recombinant gp120 or virus to CD4 is not inhibited by these antibodies, whereas infection and syncytium formation by a number of HIV isolates are blocked. These findings demonstrate that in addition to virus binding, CD4 may have an active role in membrane fusion.
    背景与目标: 人类免疫缺陷病毒(HIV)通过CD4和病毒包膜糖蛋白gp120之间的相互作用与细胞结合。先前的研究已将gp120的高亲和力结合位点定位在CD4的第一个域,并且与该区域反应的单克隆抗体(mAb)与gp120结合竞争,从而阻断了病毒的感染性和合胞体的形成。尽管对gp120与CD4的结合有了详细的了解,但对导致膜融合和病毒进入的后续事件知之甚少。我们描述了与CD4的第三个域具有反应性的两个新的单克隆抗体,可抑制继病毒结合后对HIV感染性和细胞融合至关重要的步骤。重组gp120或病毒与CD4的结合不受这些抗体的抑制,而许多HIV分离株的感染和合胞体形成却被阻止。这些发现表明,除病毒结合外,CD4可能在膜融合中发挥积极作用。
  • 【一种用于对低温电子显微照片及其局部区域进行分类的功率谱可视化的新方法。】 复制标题 收藏 收藏
    DOI:10.1016/j.jsb.2006.06.014 复制DOI
    作者列表:Jonić S,Sorzano CO,Cottevieille M,Larquet E,Boisset N
    BACKGROUND & AIMS: :In a context of automation of cryo-electron microscopy, we developed a novel method for improving visibility of diffraction rings in the power spectra of cryo-electron micrographs of vitreous ice (without carbon film or high concentration of diffracting material). We used these enhanced spectra to semi-automatically detect and remove micrographs and/or local areas introducing errors in the global 3D map (drifted and charged areas) or those unable to increase global signal-to-noise ratio (non-diffracting areas). Our strategy also allows a detection of micrographs/areas with a strong astigmatism. These images should be removed when using algorithms that do not correct astigmatism. Our sorting method is simple and fast since it uses the normalized cross-correlation between enhanced spectra and their copies rotated by 90 degrees. It owes its success mainly to the novel pre-processing of power spectra. The improved visibility also allows an easier visual check of accuracy of sorting. We show that our algorithm can even improve the visibility of diffraction rings of cryo-electron micrographs of pure water. Moreover, we show that this visibility depends strongly on ice thickness. This algorithm is implemented in the Xmipp (open-source image processing package) and is freely available for implementation in any other software package.
    背景与目标: :在低温电子显微镜自动化的背景下,我们开发了一种新颖的方法,用于改善玻璃冰(无碳膜或高浓度衍射材料)的低温电子显微镜照片的功率谱中衍射环的可见性。我们使用这些增强的光谱来半自动检测和移除显微照片和/或局部区域,从而在全局3D地图(漂移和带电区域)或无法增加全局信噪比(非衍射区域)的区域引入误差。我们的策略还允许检测具有强烈散光的显微照片/区域。当使用无法校正像散的算法时,应删除这些图像。我们的排序方法简单而快速,因为它使用了增强频谱与其旋转90度的副本之间的归一化互相关。它的成功主要归功于新颖的功率谱预处理。改进的可见性还可以使目视检查的准确性更加容易。我们证明了我们的算法甚至可以提高纯水冷冻电子显微照片的衍射环的可见性。此外,我们证明了这种能见度在很大程度上取决于冰的厚度。该算法在Xmipp(开源图像处理软件包)中实现,可免费用于任何其他软件包中。
  • 【9q13-q21.12的新型缺失变体和9q12 / qh的经典常色变体涉及大片段部分重复的着丝粒体常染色质的缺失,重复和三重复。】 复制标题 收藏 收藏
    DOI:10.1038/sj.ejhg.5201720 复制DOI
    作者列表:Willatt LR,Barber JC,Clarkson A,Simonic I,Raymond FL,Docherty Z,Ogilvie CM
    BACKGROUND & AIMS: :Large-scale copy number variation that is cytogenetically visible in normal individuals has been described as euchromatic variation but needs to be distinguished from pathogenic euchromatic deletion or duplication. Here, we report eight patients (three families and two individuals) with interstitial deletions of 9q13-q21.12. Fluorescence in situ hybridisation with a large panel of BACs showed that all the deleted clones were from extensive tracts of segmentally duplicated euchromatin, copies of which map to both the long and short arms of chromosome 9. The variety of reasons for which these patients were ascertained, and the phenotypically normal parents, indicates that this is a novel euchromatic variant with no phenotypic effect. Further, four patients with classical euchromatic variants of 9q12/qh or 9p12 were also shown to have duplications or triplications of this segmentally duplicated material common to both 9p and 9q. The cytogenetic boundaries between the segmentally duplicated regions and flanking unique sequences were mapped to 9p13.1 in the short arm (BAC RP11-402N8 at 38.7 Mb) and to 9q21.12 in the long arm (BAC RP11-88I18 at 70.3 Mb). The BACs identified in this study should in future make it possible to differentiate between clinically significant deletions or duplications and euchromatic variants with no established phenotypic consequences.
    背景与目标: :在正常个体中在细胞遗传学上可见的大规模拷贝数变异已被描述为常染色体变异,但需要与致病性常染色体缺失或复制区分开。在这里,我们报告8例患者(3个家庭和2个个体)的间质缺失9q13-q21.12。与大量BAC的荧光原位杂交表明,所有缺失的克隆均来自节段重复的常染色质的广泛片段,其拷贝定位于9号染色体的长臂和短臂。确定这些患者的各种原因和表型正常的父母,表明这是一个新的常染色体变异,没有表型作用。此外,还显示了四名具有9q12 / qh或9p12的经典常染色体变体的患者具有这种重复出现或重复的9p12和9q共同的节段重复材料。片段重复区域和侧翼独特序列之间的细胞遗传学边界在短臂中定位为9p13.1(BAC RP11-402N8,38.7 Mb),在长臂中定位9q21.12,长臂(BAC RP11-88I18,70.3 Mb)。这项研究中确定的BAC将来应该可以区分具有临床意义的缺失或重复和常染色体变异,而没有确定的表型后果。
  • 【辐射诱发的旁观者和其他非靶向效应:癌症治疗中的新干预点?】 复制标题 收藏 收藏
    DOI:10.2174/156800906777723976 复制DOI
    作者列表:Mothersill C,Seymour C
    BACKGROUND & AIMS: :A major problem in the search for new cancer drug targets is that the drugs are often toxic to normal tissues and require high doses to kill tumor cells. Therefore cellular targets which appear to involve low dose responses to cancer therapy are especially interesting since they could selectively target normal tissues which are not targeted by the treatment and thus may be responsible for unpleasant side effects or may be amenable to exploitation in order to improve the therapeutic ratio. One such target, which is the subject of this review, is radiation-induced bystander effects [RIBE], which result in the observation of radiation like responses in cells which have not been irradiated. RIBE is a novel phenomenon which indicates that at low doses, cell signaling is more important than direct DNA damage. Historically, DNA has always been considered to be the target for radiation therapy. The growing realization that signaling is important opens up several important therapeutic strategies which will be discussed in this review. RIBE appears to be the result of a generalized stress response in tissues or cells which is expressed at the level of the tissue, organ or organism rather than at the level of the individual cell. The signals may be produced by all exposed cells, but the response may require a quorum of cells in order to be expressed. The major response involving low LET (x- or gamma-ray) radiation exposure discussed in the existing literature is a death response. This has many characteristics of apoptosis but may be detected in cell lines without p53 expression, although the death response is suppressed in many tumor cell lines. While a death response in unirradiated normal cells around a tumor might appear to be adverse, it can in fact be protective and remove damaged cells from the population. If harnessed correctly, it could lead to the development of new drugs aimed not at tissue destruction but at enabling homeostatic mechanisms to control tumor expansion. In this scenario, the level of harmful or beneficial response will be related to the background damage, carried by the cell population, and the genetic programme determining response to damage. This focus may be important when attempting to predict the consequences of mixed therapies involving radiation and other cytotoxic agents. In this review, our current knowledge of the mechanisms underlying the induction of bystander effects by ionizing radiation is reviewed, and the question of how bystander effects may be harnessed to produce a new generation of anti-cancer drugs aimed at stabilization of tissue homeostasis rather than tissue destruction is considered.
    背景与目标: :寻找新的癌症药物靶标的主要问题是该药物通常对正常组织有毒性,需要高剂量才能杀死肿瘤细胞。因此,细胞靶标似乎涉及对癌症治疗的低剂量反应,因此特别令人感兴趣,因为它们可以选择性地靶向未被治疗靶标的正常组织,因此可能引起令人不快的副作用,或者可能适于利用以改善治疗效果。治疗比率。辐射诱导的旁观者效应[RIBE]是本综述的主题之一,该效应导致在未辐射的细胞中观察到辐射样反应。 RIBE是一种新现象,表明在低剂量时,细胞信号传导比直接DNA损伤更为重要。从历史上看,DNA一直被认为是放射治疗的目标。人们日益认识到信号转导很重要,这开启了几种重要的治疗策略,本文将对此进行讨论。 RIBE似乎是组织或细胞中普遍的应激反应的结果,这种应激反应是在组织,器官或生物体的水平而不是单个细胞的水平表达的。信号可能由所有暴露的细胞产生,但响应可能需要一定数量的细胞才能表达。现有文献中讨论的涉及低LET(X射线或γ射线)辐射暴露的主要反应是死亡反应。这具有许多细胞凋亡特征,但尽管在许多肿瘤细胞系中死亡反应受到抑制,但在没有p53表达的细胞系中可能检测到。虽然在肿瘤周围未照射的正常细胞中的死亡反应似乎是不利的,但实际上可以起到保护作用,并从群体中清除受损的细胞。如果利用得当,它可能会导致开发新药物,其目的不是破坏组织,而是使稳态机制能够控制肿瘤的扩展。在这种情况下,有害或有益反应的水平将与细胞群体所携带的背景损伤以及决定对损伤的反应的遗传程序有关。当试图预测涉及放射线和其他细胞毒剂的混合疗法的后果时,这一重点可能很重要。在这篇综述中,我们对电离辐射诱发旁观者效应的潜在机制的现有知识进行了综述,并探讨了如何利用旁观者效应来生产旨在稳定组织稳态而不是稳定组织的新一代抗癌药物的问题。考虑组织破坏。
  • 【MEN15596,新型非肽速激肽NK2受体拮抗剂。】 复制标题 收藏 收藏
    DOI:10.1016/j.ejphar.2006.08.021 复制DOI
    作者列表:Cialdai C,Tramontana M,Patacchini R,Lecci A,Catalani C,Catalioto RM,Meini S,Valenti C,Altamura M,Giuliani S,Maggi CA
    BACKGROUND & AIMS: :The pharmacological profile of MEN15596 or (6-methyl-benzo[b]thiophene-2-carboxylic acid [1-(2-phenyl-1R-{[1-(tetrahydropyran-4-ylmethyl)-piperidin-4-ylmethyl]-carbamoyl}-ethylcarbamoyl)-cyclopentyl]-amide), a novel potent and selective tachykinin NK2 receptor antagonist endowed with oral activity, is described. At the human recombinant tachykinin NK2 receptor, MEN15596 showed subnanomolar affinity (pKi 10.1) and potently antagonized (pKB 9.1) the neurokinin A-induced intracellular calcium release. MEN15596 selectivity for the tachykinin NK2 receptor was assessed by binding studies at the recombinant tachykinin NK1 (pKi 6.1) and NK3 (pKi 6.4) receptors, and at a number of 34 molecular targets including receptors, transporters and ion channels. In isolated smooth muscle preparations MEN15596 showed a marked species selectivity at the tachykinin NK2 receptor with the highest antagonist potency in guinea-pig colon, human and pig bladder (pKB 9.3, 9.2 and 8.8, respectively) whereas it was three orders of magnitude less potent in the rat and mouse urinary bladder (pKB 6.3 and 5.8, respectively). In agreement with binding experiments, MEN15596 showed low potency in blocking selective NK1 or NK3 receptor agonist-induced contractions of guinea-pig ileum preparations (pA2
    背景与目标: :MEN15596或(6-甲基-苯并[b]噻吩-2-羧酸[1-(2-苯基-1R-{[1-(四氢吡喃-4-基甲基)-哌啶-4-基甲基]描述了一种具有口服活性的新型有效且选择性的速激肽NK2受体拮抗剂-(氨基甲酰基}-乙基氨基甲酰基)-环戊基]-酰胺)。在人类重组速激肽NK2受体上,MEN15596显示出纳摩尔亲和力(pKi 10.1),并强烈拮抗(kind 9.1)神经激肽A诱导的细胞内钙释放。通过在重组速激肽NK1(pKi 6.1)和NK3(pKi 6.4)受体以及包括受体,转运蛋白和离子通道在内的34个分子靶标上的结合研究评估了MEN15596对速激肽NK2受体的选择性。在分离的平滑肌制剂中,MEN15596在速激肽NK2受体上具有明显的物种选择性,在豚鼠结肠,人和猪膀胱中的拮抗效力最高(分别为pKB 9.3、9.2和8.8),而效力却低了三个数量级。在大鼠和小鼠的膀胱中(分别为pKB 6.3和5.8)。与结合实验一致,MEN15596在阻断豚鼠回肠制剂的选择性NK1或NK3受体激动剂诱导的收缩中表现出较低的效力(pA2 <或= 6)。在麻醉的豚鼠中,MEN15596以剂量相关和持续的方式抑制选择性速激肽NK2受体激动剂[βAla8]神经激肽A(4-10)(3 nmol / kg iv)诱导的结肠收缩,无论是静脉注射(ED50) 0.18 micromol / kg),十二指肠内(ED50 3.16 micromol / kg)或口服(10-30 micromol / kg),以3 micromol / kg静脉注射时,不会影响NK1受体选择性激动剂[Sar9]物质产生的结肠收缩对砜(3nmol / kg iv)。另外,MEN15596可有效抑制静脉内注射产生的支气管收缩。 βAla8]神经激肽A(4-10)的给药。总体而言,结果表明MEN15596是一种有效的,选择性的速激肽NK2受体拮抗剂,对豚鼠,猪和人的受体具有高亲和力和效力,在体内实验中作用时间长,口服生物利用度好。
  • 【从人甲状腺中克隆和表征新型碘酪氨酸脱卤酶1(DEHAL1)DEHAL1C:与DEHAL1和DEHAL1B的比较。】 复制标题 收藏 收藏
    DOI:10.1089/thy.2006.16.715 复制DOI
    作者列表:Gnidehou S,Lacroix L,Sezan A,Ohayon R,Noël-Hudson MS,Morand S,Francon J,Courtin F,Virion A,Dupuy C
    BACKGROUND & AIMS: :The human iodotyrosine dehalogenase 1 (DEHAL1) gene is composed of six exons. Two isoforms (DEHAL1 and DEHAL1B) have been published in GenBank, both of which have a nitroreductase domain and arise from differential splicing in exon 5. We recently showed that the DEHAL1 isoform is a transmembrane protein that efficiently catalyzes the NADPH-dependent deiodination of mono (L-MIT) and diiodotyrosine (L-DIT) in human embryonic kidney-293 (HEK293) cells. In the present study, we establish the existence of a new transcript, DEHAL1C, in the human thyroid with a terminal exon that lacks in the DEHAL1 transcript. This exon is the complete exon 5, which is spliced in the DEHAL1B mRNA variant. These two variants encode proteins with differing C-terminal domains. Using quantitative reverse transcription polymerase chain reaction, we found that the expression of the mRNA of DEHAL1C and DEHAL1B was lower than that of DEHAL1 mRNA in the thyroid. We also observed that human DEHAL1B and DEHAL1C proteins are rapidly degraded in stably transfected HEK293 cells, unlike the DEHAL1 protein, and that exposure to the proteasome inhibitor MG132 resulted in accumulation of these proteins that was markedly time- and concentration-dependent. These findings show that the cytoplasmic tail could play a role in the stability of the protein.
    背景与目标: :人碘酪氨酸脱卤素酶1(DEHAL1)基因由六个外显子组成。 GenBank中已公开了两种同工型(DEHAL1和DEHAL1B),它们均具有硝基还原酶结构域,并来自外显子5的差异剪接。 (L-MIT)和二碘代酪氨酸(L-DIT)在人类胚胎肾293(HEK293)细胞中。在本研究中,我们在人甲状腺中建立了一个新的转录物DEHAL1C的存在,其末端外显子缺少DEHAL1转录物。该外显子是完整的外显子5,其剪接在DEHAL1B mRNA变异体中。这两个变体编码具有不同C末端结构域的蛋白质。通过定量逆转录聚合酶链反应,我们发现甲状腺中DEHAL1C和DEHAL1B的mRNA表达低于DEHAL1 mRNA的表达。我们还观察到,与DEHAL1蛋白不同,人DEHAL1B和DEHAL1C蛋白在稳定转染的HEK293细胞中迅速降解,并且暴露于蛋白酶体抑制剂MG132导致这些蛋白的积累具有明显的时间和浓度依赖性。这些发现表明,胞质尾部可以在蛋白质的稳定性中起作用。

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